All software
ROOT
An open-source data analysis framework used by high energy physics and others.
- (AppleScript)
- (Assembly)
- (Batchfile)
- + 27
Rosemary
Rosemary is a plugin for YASGUI (Yet Another SPARQL GUI), facilitating creation of SPARQL queries without requiring knowledge of SPARQL.
- Data
- database
- Data management
- + 10
- (CSS)
- (Dockerfile)
- (HTML)
- + 1
rspacer
rspacer is an R package that wraps the RSpace Electronic Lab Notebook (https://www.researchspace.com/) API. It provides convenience functions to browse, search, create, and edit your RSpace documents. In addition, it enables filling RSpace templates using R Markdown/Quarto reports or tabular data.
- Electronic Lab Notebook
- FAIR
- research data management
- + 1
- (HTML)
- (R)
RTEMIS
Advanced Machine Learning and Visualization
- Artificial Intelligence
- (allow_forking)
- (archived)
- (archive_url)
- + 84
RTpipeline
RTpipeline is a comprehensive, research-grade pipeline that transforms raw DICOM radiotherapy exports into analysis-ready data. It bridges the technical gap between clinical Treatment Planning Systems (TPS) and statistical/ML analysis
- Clinical workflow and applications
- (Dockerfile)
- (HTML)
- ("Jupyter Notebook")
- + 2
RTToolbox
RTToolbox is a software library to support quantitative analysis of treatment outcome for radiotherapy.
- Treatment Planning and dosimetry
- (C)
- (C++)
- (CMake)
Rucio policy package for KM3NeT
Package with custom policies for the Rucio instance of KM3NeT.
- Big data
- Data management
- (Python)
Satsense
A Python library for land use classification based in satellite images.
- Image processing
- Machine learning
- ("Jupyter Notebook")
- (Python)
Scholy – Core
This project is part of Scholy, a linked open data platform for realizing directories of scholar.
- Grails
- RDF
- scholar directory
- + 3
Scifeon Lims, ELN and Workflow Automation
Scifeon is a modular lab informatics platform combining LIMS and ELN to streamline workflows, ensure compliance, and increase productivity—designed for biotech and regulated labs.
- auditory processing
- Big data
- bioinformatics
- + 14
scikit-talk
Scikit-talk is an open-source toolkit for processing collections of real-world conversational speech in Python. The toolkit aims to facilitate the exploration of large collections of transcriptions and annotations of conversational interaction.
- conversation
- language corpora
- turn-taking
- (Python)
- (Shell)
seahtrue
Seahtrue processes XF analyzer data on oxygen consumption and acidification from Agilent Wave .xlsx exports into tidy, nested tibbles, enabling reproducible analysis, preprocessing checks, advanced visualisation, and statistics for open metabolic research.
- bioconductor
- metabolism
- R
- + 2
- (R)