All software
Overture Data Management System
Overture is a collection of open-source, extendable solutions for big-data genomic science that research institutions and individual researchers can use to support their work.
- authentication
- cloud storage
- genomics
- + 2
- Dockerfile
- Java
- Makefile
- + 1
Overture Ego
A stateless authorization and user management service.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- Java
- Makefile
- + 1
Overture Maestro
Organizing your distributed data into one index.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- JavaScript
- Makefile
- + 1
Overture Score
Transfer data quickly and easily to and from any cloud-based storage system.
- Cancer Genomics
- Cloud Storage & Transfer
- Dockerfile
- Java
- Makefile
- + 1
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Batchfile
- Dockerfile
- Go
- + 7
parareal
This package runs the parareal algorithm on a black-box simulator. Parallelisation is managed through Dask.
- High performance computing
- Numerical analysis
- CSS
- Dhall
- HTML
- + 5
ParticlePhaseSpace
A set of tools for processing and analysing particle phase space files. Designed for use with Monte Carlo simulations, particularly for proton therapy.
- Treatment Planning and dosimetry
- Batchfile
- Jupyter Notebook
- Makefile
- + 1
PSRDADA python
If you want to do astrophysics in python, this could come in handy. Connect to a radiotelescope and process data in real-time.
- Cython
- Makefile
- Python
Pure3D
A web platform for exploring 3D digital collections and editions in cultural heritage.
- CSS
- HTML
- JavaScript
- + 4
Pydicer
Eases conversion of Radiotherapy DICOM data to research-ready format (NIfTI). Provides analysis functionality.
- Imaging and Image Processing
- Makefile
- Python
- Shell
pydicom
Reads, modifies, and writes DICOM data in a "pythonic" way. General-purpose framework, does not handle specifics of individual SOP classes.
- Software Engineering and Data Infrastructure
- Makefile
- Python
- Shell
python-pcl
Use the industry-standard Point Cloud Library from within Python.
- Big data
- High performance computing
- C
- C++
- Makefile
- + 2