All software
swiftmhc
SwiftMHC is a deep learning algorithm for predicting pMHC structure and binding affinity at the same time.
- deep learning
- Protein-Protein Interaction
- Transformer
- Jupyter Notebook
- Mask
- Python
- + 1
Effects of PLU Polling Interval
The codes associated with the publication: The Effects of PLU Polling Interval on the Reconstructed OD Matrix: A Dutch Case Study Using a Data-Driven Method
- Bayesian
- GSM
- OD matrix
- + 2
- Jupyter Notebook
- Markdown
- Other
epistemic-bellman-operators
Epistemic Bellman Operators; code underlying the dissertation ‘Bayesian Model-Free Deep Reinforcement Learning’
- Bayesian modelling
- Deep Reinforcement Learning (DRL)
- dynamic programming
- + 2
- Jupyter Notebook
- Markdown
- Python
IntervalMDPAbstractions.jl_ReproducibilityPackage
Data and code underlying the publication: Scalable control synthesis for stochastic systems via structural IMDP abstractions
- embedded systems
- Markov processes
- Stochastic control and optimization
- C
- C++
- HTML
- + 10
P1-data-combination-code
Code to paper "Changing Sea Level, Changing Shorelines: Integration of Remote Sensing Observations at the Terschelling Barrier Island"
- coastline
- Remote sensing
- sea level
- + 1
- Jupyter Notebook
- large-text-file
- Markdown
- + 1
reference_set_selection_benchmark
Code underlying the publication: "Benchmarking the impact of reference genome selection on taxonomic profiling accuracy"
- Genome Selection
- Lineage Abundance Estimation
- Sequence Clustering
- + 2
- Jupyter Notebook
- Markdown
- Other
- + 3
Software supporting the article: Community Detection for Temporal Weighted Bipartite Networks
Software supporting the article: Community Detection for Temporal Weighted Bipartite Networks
- Bipartite Network
- Bipartite Networks
- Community Detection
- + 4
- Jupyter Notebook
- Markdown
- Other
- + 1
topological_SB_matching
Code underlying: Topological Schrödinger Bridge Matching
- distribution matching
- generative models
- graph and simplicial complex
- + 1
- Jupyter Notebook
- Markdown
- Other
- + 3
anonymoUUs
Python package to replace identifiable strings in multiple files and folders at once
- de-identification
- python
- text
- Jupyter Notebook
- Python
byteparsing
Parser library for reading custom binary files from Python.
- Big data
- Multi-scale & multi model simulations
- Optimized data handling
- Batchfile
- C++
- CSS
- + 5
dCacheFS
Python file-system interface for dCache storages.
- Data
- Inter-operability & linked data
- Optimized data handling
- + 1
- Jupyter Notebook
- Python
PAVICS
PAVICS is a virtual laboratory facilitating the analysis of climate data. It provides access to several data collections ranging from observations, climate projections and reanalyses. It also provides a Python programming environment to analyze this data without the need to download it.
- analysis
- climate
- Climate change
- + 5
- CSS
- HTML
- JavaScript
- + 3