All software
Structure from Motion
Construct 3D pointclouds from a set of 2D images
- Dockerfile
- Java
- MATLAB
- + 2
sv-gen
Highly portable parallel workflow to generate artificial genomes with structural variants.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell
Swan
Swan is a Python package to create statistical models to predict molecular properties
- Machine learning
- Jupyter Notebook
- Python
TaxoTagger Webapp
Webapp for DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- Python
Tissue Simulation Toolkit
Tissue Simulation Toolkit (TST) 2.0 is an efficient C++ library for two-dimensional simulations of Glazier and Graner's Cellular Potts model (Glazier and Graner, 1993). It is suitable for simulations with live visualization as well as batch simulations on clusters.
- Cellular Potts Model
- Chemotaxis
- Embryology
- + 1
- C
- C++
- Cuda
- + 6
TOPAS
The TOPAS toolkit aims to provide an intuitive Monte Carlo framework for medical physicists and researchers in related fields
- Treatment Planning and dosimetry
- C++
- CMake
- Python
- + 1
TOPASopt
A toolkit for performing optimization with the TOPAS Monte Carlo simulation package. Includes tools for running simulations and analyzing results.
- Treatment Planning and dosimetry
- Batchfile
- Makefile
- PLSQL
- + 1
trex2champ
trex2champ is a tool that allows reading output files of quantum chemistry codes (GAMESS and trexio files) and writing input files for CHAMP in V3.0 format.
- Inter-operability & linked data
- python
- Python
Trixi.jl
Adaptive high-order numerical simulations of hyperbolic PDEs in Julia
- Gnuplot
- Julia
- Jupyter Notebook
- + 2
tsdf
A package to read, modify and write TSDF data in Python.
- Time Series
- Python
- TeX
Tweet_collector
This project is aimed to help researchers to use Academic Research product track to collect tweets of their interest and analyze them.
- collect tweet
- python
- search tweet
- + 1
- Python
UFEMISM2.0
The successor of UFEMISM, has all of its features (and more?), but is based on the distributed architecture introduced in minimism.
- Finite volume method
- ice sheet
- MPI
- + 1
- CMake
- Fortran
- HTML
- + 6