All software
STMtools
Xarray extension for Space-Time Matrix.
- Deformation
- InSAR
- PSI
- + 2
- Jupyter Notebook
- Python
Streetscapes
Streetscapes is a package for code for downloading, segmenting and analysing images from Mapillary and KartaView.
- deep learning
- geospatial
- Image processing
- + 2
- Jupyter Notebook
- Python
Streetview Segmentation
Perform semantic segmentation on images, using Facebook's Mask2Former models.
- docker
- image recognition
- Machine learning
- + 2
- Dockerfile
- Python
Stroll
Semantic Role labeling for Dutch. Understanding who does what, where, to whom.
- Text analysis & natural language processing
- Python
- Shell
Structure from Motion
Construct 3D pointclouds from a set of 2D images
- Dockerfile
- Java
- MATLAB
- + 2
sv-gen
Highly portable parallel workflow to generate artificial genomes with structural variants.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell
Swan
Swan is a Python package to create statistical models to predict molecular properties
- Machine learning
- Jupyter Notebook
- Python
TaxoTagger Webapp
Webapp for DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- Python
Tissue Simulation Toolkit
Tissue Simulation Toolkit (TST) 2.0 is an efficient C++ library for two-dimensional simulations of Glazier and Graner's Cellular Potts model (Glazier and Graner, 1993). It is suitable for simulations with live visualization as well as batch simulations on clusters.
- Cellular Potts Model
- Chemotaxis
- Embryology
- + 1
- C
- C++
- Cuda
- + 6
TOPAS
The TOPAS toolkit aims to provide an intuitive Monte Carlo framework for medical physicists and researchers in related fields
- Treatment Planning and dosimetry
- C++
- CMake
- Python
- + 1
TOPASopt
A toolkit for performing optimization with the TOPAS Monte Carlo simulation package. Includes tools for running simulations and analyzing results.
- Treatment Planning and dosimetry
- Batchfile
- Makefile
- PLSQL
- + 1
trex2champ
trex2champ is a tool that allows reading output files of quantum chemistry codes (GAMESS and trexio files) and writing input files for CHAMP in V3.0 format.
- Inter-operability & linked data
- python
- Python