All software
TaxoTagger Webapp
Webapp for DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- Python
Tissue Simulation Toolkit
Tissue Simulation Toolkit (TST) 2.0 is an efficient C++ library for two-dimensional simulations of Glazier and Graner's Cellular Potts model (Glazier and Graner, 1993). It is suitable for simulations with live visualization as well as batch simulations on clusters.
- Cellular Potts Model
- Chemotaxis
- Embryology
- + 1
- C++
- Python
- Cuda
- + 5
trex2champ
trex2champ is a tool that allows reading output files of quantum chemistry codes (GAMESS and trexio files) and writing input files for CHAMP in V3.0 format.
- Inter-operability & linked data
- python
- Python
tsdf
A package to read, modify and write TSDF data in Python.
- Time Series
- Python
- TeX
Tweet_collector
This project is aimed to help researchers to use Academic Research product track to collect tweets of their interest and analyze them.
- collect tweet
- python
- search tweet
- + 1
- Python
UFEMISM2.0
The successor of UFEMISM, has all of its features (and more?), but is based on the distributed architecture introduced in minimism.
- Finite volume method
- ice sheet
- MPI
- + 1
- Fortran
- MATLAB
- Python
- + 5
Unraphael
Unraphael is a computer vision tool for art history, designed to support the analysis of figure-outline similarities in images to study Renaissance copying practices. Its user-friendly interface lets researchers inspect structural patterns, revealing insights into artistic techniques.
- computational art analysis
- computer vision
- Image preprocessing
- + 3
- Python
- Dockerfile
- CSS
UNSAT3D
Soil health is essential for infrastructure and plant growth. The UNSAT project aims to improve 3D soil image processing using machine learning and high-fidelity simulation data to study water transport and root-soil interactions during maize growth.
- Data Analysis
- Machine learning
- Python
- Shell
Verticox+
Verticox+ is a Cox proportional hazards algorithm for vertically distributed data. The solution is based on the Verticox algorithm from Dai et al., 2022. It has been adapted to be used within the Vantage6 framework.
- federated learning
- Java
- privacy preservation
- + 3
- Jupyter Notebook
- Python
- Java
- + 4
vqls-prototype
Variational Quantum Linear Solver Library.
- Numerical analysis
- Quantum Computing
- Python
wntr-quantum
wntr-quantum (pronounced winter-quantum) extends the capabilities of the popular wntr package for water network modelling and analysis to quantum computing routine.
- Quantum Computing
- Water Distribution Networks
- Python
- Shell
xarray-regrid
An xarray plugin that adds regridding utilities for datasets and dataarrays.
- geospatial
- python
- xarray
- Python