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PanTools-pipeline-v4

General purpose Snakemake pipeline for PanTools v4.

Data Analysis
genomics
pangenomics

Python
Dockerfile
Shell

paradigma

A toolbox to calculate digital biomarkers for wearable sensors in Parkinson's disease.

MATLAB
Python

parareal

This package runs the parareal algorithm on a black-box simulator. Parallelisation is managed through Dask.

High performance computing
Numerical analysis

CSS
Jupyter Notebook
Python
+ 5

PattyAnalytics

Library for aligning and scaling one point cloud to an other.

Big data
Point Cloud

Python

PBI

An open-source python package to identify breakthrough innovations within patents.

Breakthrough innovations
jupyter notebooks
parallel computing
+ 2

Python

pdbtbx-ts

Want to parse Protein Data Bank files in JavaScript

Optimized data handling

Rust
JavaScript
TypeScript

Petri Nets on Hyperledger

Decentralized coordination of multi-domain workflows using Hyperledger Fabric blockchain and Petri nets.

Blockchain
hyperledger
Petri net
+ 1

JavaScript
CSS
HTML
+ 1

Platalea

Platalea contains deep neural network architectures for modeling spoken language from multiple sources at once: audio, and simultaneously images, text or video. This can be used to learn about what different context sources add to the language acquisition process.

Python

PowerSensor3

PowerSensor is a low-cost, custom-built device that measures the instantaneous power consumption of GPUs and other devices at a high time resolution.

GPU
High performance computing

C
C++
Python
+ 3

PSRDADA python

If you want to do astrophysics in python, this could come in handy. Connect to a radiotelescope and process data in real-time.

Cython
Python
Makefile

PuReGoMe

Analyzes social media messages for polarity and stance towards governmental COVID-19 measures

Machine learning
Social media

Jupyter Notebook
Python
Shell

PyELSEPA

Python wrapper for ELSEPA, a numeric code for computing elastic scattering cross-sections for electrons and positrons off neutral atoms.

Python
Dockerfile