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Logo for Rucio deployment for KM3NeT

Rucio deployment for KM3NeT

This repository contains the Rucio deployment for KM3NeT. It can be used as an example of how to deploy Rucio.

  • Big data
  • High performance computing
    2
    1

    SalientDescriptor-matlab

    If you need to automate your image matching tasks for the purposes of object detection or photo-identification in an easy way, the SalientDescriptor-matlab is right for you

    • Image processing
    • MATLAB
    • HTML
    1
    1

    SARXarray

    An Xarray extension to process coregistered Single Look Complex (SLC) image stacks acquired by Synthetic Aperture Radar (SAR).

    • Dask
    • InSAR
    • Interferometry
    • + 6
    • Python
    4
    1

    scriptcwl

    Create CWL workflows by writing a simple Python script.

    • CWL
    • Workflow technologies
    • Python
    • Common Workflow Language
    8
    1

    self-hosted runners

    Collection of resources to set up GitHub runners on self-hosted infrastructure

    • High performance computing
    • Shell
    • Dockerfile
    5
    1
    Logo for SimVascular

    SimVascular

    The only fully open source software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

    • Cardiovascular
    • Fluid mechanics
    • Medical image computing
    • + 1
    • C++
    • Makefile
    • Python
    • + 9
    4
    1
    Logo for sirup

    sirup

    Sirup is an open-source Python package that makes it easy to connect to, and rotate across, VPN servers provided by services such as ProtonVPN and Surfshark.

    • ip-rotation
    • openvpn
    • python
    • + 1
    • Python
    • Shell
    1
    1
    Logo for SlicerIGT

    SlicerIGT

    Software toolkit for rapid development of image-guided therapy systems - for minimally invasive medical procedures, where operators rely on computer-generated images rather than direct sight of the target organs.

    • 3D Slicer
    • deep learning
    • Medical image computing
    • + 2
    • C++
    • Python
    • CMake
    2
    1

    snakemake-wrf

    A snakemake workflow to run WRF, including pre- and postprocessing. See our blog post for a detailed description.

    • geospatial
    • High performance computing
    • python
    • + 1
    • Jupyter Notebook
    • Python
    • Shell
    2
    1
    Logo for TaxoTagger

    TaxoTagger

    DNA barcode identification, powered by semantic searching.

    • Fungi
    • Machine learning
    • semantic search
    • + 3
    • Python
    • Makefile
    • Mustache
    1
    1
    Logo for Umple

    Umple

    Umple allows generation of code in Java, PHP and other languages from a textual representation of UML state machines, associations and other modeling constructs, thus saving coding effort

    • Code Generation
    • Software Modeling
    • State Machines
    • + 1
    • Java
    • JavaScript
    • GAP
    • + 17
    14
    1

    ValidSense

    The ValidSense toolbox aims to assess the agreement between two quantitative methods using the Limits of Agreement analysis, aka the Bland-Altman analysis. Four existing variants are available. Moreover, a Longitudinal analysis is developed to assess agreement over time.

    • Agreement Analysis
    • Bland-Altman
    • Limits of Agreement
    • + 1
    • Python
    4
    1