All software
MapReader
MapReader is an end-to-end computer vision (CV) pipeline for exploring and analyzing images at scale.
- computer vision
- digital humanities
- geospatial
- + 4
- Python
- TeX
- Dockerfile
- + 1
Clustering Geo-data Cubes
Tool to perform cluster analysis of multi-dimensional geospatial data, running on local or distributed systems.
- Big data
- geospatial
- Machine learning
- + 1
- Python
- Jupyter Notebook
- TeX
pdb2sql
Fast and versatile Python package that leverages SQL queries to parse, manipulate and process biomolecular structure files. The structure files should be in the PDB format and are available on www.rcsb.org.
- Big data
- Optimized data handling
- Python
- TeX
- Makefile
Bacting
Bacting is an open-source platform for chemo- and bioinformatics based on Bioclipse that defines a number of common domain objects and wraps common functionality, providing a toolkit independent, scriptable solution to handle data from the life sciences.
- bioinformatics
- Cheminformatics
- Java
- TeX
cffconvert
Command line tool to convert CITATION.cff files to various formats used by reference managers such as Zotero and JabRef.
- Python
- TeX
- HTML
- + 1
citation.js
Citation.js converts formats like BibTeX, Wikidata JSON and BibJSON to CSL-JSON to convert to other formats like APA, Vancouver, RIS and back to BibTeX.
- Bibliography
- BibTeX
- Data Citation
- + 2
- JavaScript
- TeX
- Roff
LUE
LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.
- Agent-based modeling
- environmental modelling
- field based modelling
- + 6
- C++
- Python
- CMake
- + 6
WEARDA
WEARDA: recording wearable sensor data for human activity monitoring.
- embedded software
- GPS
- Human activity monitoring
- + 4
- C
- TeX
AstronomicAL
An interactive dashboard for visualisation, integration and classification of data using Active Learning.
- Active Learning
- Classification
- Data Analysis
- + 11
- Python
- TeX
dhdt
A photohypsometric Python library to estimate glacier elevation change via optical remote sensing imagery
- geospatial
- Glacier
- image
- + 2
- Python
- TeX
MOTrainer
Measurement Operator Trainer for data assimilation purposes.
- Data assimilation
- High performance computing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- TeX
- + 1
byteparsing
Parser library for reading custom binary files from Python.
- Big data
- Multi-scale & multi model simulations
- Optimized data handling
- Jupyter Notebook
- Python
- C++
- + 5