All software
Cross-perspective Topic Modeling
An application that uses cross-perspective topic modeling to extract topics and opinions from text and provides insight into how they change over time.
- Text analysis & natural language processing
- Python
- Jupyter Notebook
- Shell
DALES
DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.
- Fortran
- C
- TeX
- + 8
ExploreASL
ExploreASL is a pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images. It is designed as a multi-OS, open-source, collaborative framework that facilitates cross-pollination between image processing method developers and clinical investigators.
- ASL
- Image processing
- MRI
- MATLAB
- C
- Python
FastMLC
Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.
- Big data
- Machine learning
- Visualization
- C++
- C
- Makefile
- + 5
SIGA.py
Make genome annotations semantically interoperable
- Inter-operability & linked data
- Python
Global analysis of DNA methylation in hepatocellular carcinoma via a whole-genome bisulfite sequencing approach
Global analysis of DNA methylation in hepatocellular carcinoma via a whole-genome bisulfite sequencing approach
- DNA methylation analyses
- prognosis model
- WGBS (Whole Genome Bisulfite Sequencing)
HCOMP2022_ARCHIE
Analogy-based explanation evaluation dataset for HCOMP 2022 paper "It Is Like Finding a Polar Bear in the Savannah! Concept-level AI Explanations with Analogical Inference from Commonsense Knowledge."
- Analogy
- Commonsense Knowledge
- Concept-level Explanation
- + 1
- Other
- Python
- Markdown
ML-MoCap - Controller and Camera module Images
ML-MoCap - Controller and Camera module Images
- human movement
- markerless
- MarkerLess Motion Capture (ML-MoCap)
- + 1
SWMM_GNN_Repository_Paper_version
SWMM GNN metamodel – Code for paper: Transferable and Data Efficient Metamodeling of Storm Water System Nodal Depths Using Auto-Regressive Graph Neural Networks
- GNN
- Graph neural networks
- Machine learning
- + 5
- Other
- Python
- Jupyter Notebook
- + 2
TraViA: a Traffic data Visualization and Annotation tool in Python
TraViA: a Traffic data Visualization and Annotation tool in Python
- HighD
- NGSIM
- pNEUMA
- + 2
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- Python
- CSS
- TypeScript
- + 5
Microscopy data, code and analysis underlying the publication "Optical STEM detection for scanning electron microscopy"
Microscopy data, code and analysis underlying the publication "Optical STEM detection for scanning electron microscopy"
- Electron Detection
- Instrumentation Development
- Scanning Electron Microscopy
- + 2
- Other
- Markdown
- Jupyter Notebook
- + 2