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181-192 of 366

TSMCTS: Code underlying the publication: Twice Sequential Monte Carlo for Tree Search

Policy Improvement
Reinforcement learning
Search
+ 2

Markdown
Other
Python
+ 2

VeriABI

Software supporting the MSc thesis "Binary Interface Compatibility for Library Integration in C++": VeriABI, a machine-checked ABI compatibility checker

ABI
API
Application Binary Interface
+ 6

C
C++
Markdown
+ 2

Yeast mRNA tracking: NE segmentation, MLE fitting and particle tracking code and data

MLE
mRNA tracking
nuclear envelope
+ 3

Markdown
Other
Python
+ 2

Abinit

Abinit is a software package based on density functional theory for calculating the properties of solids.

C
C++
CMake
+ 15

Aiida-CHAMP

The aiida-champ plugin to handle the CHAMP workflow using AiiDA.

python
workflow

Python
Shell

aiproteomics

Generate and compare deep learning models for generating synthetic mass spectral libraries

Machine learning
mass spectrometry
phosphoproteomics
+ 1

Jupyter Notebook
Python
Shell

MPI-AMRVAC

MPI-AMRVAC is a parallel adaptive mesh refinement framework aimed at solving (primarily hyperbolic) partial differential equations by a number of different numerical schemes. The emphasis is on (near) conservation laws and on shock-dominated problems in particular.

Fortran
FPP
Jupyter Notebook
+ 4

Anatomy Matters

Reproducible analysis code for anatomical tumor–immune archetypes in diffuse large B-cell lymphoma.

computational pathology
diffuse large B-cell lymphoma
jupyter notebooks
+ 4

Jupyter Notebook
PowerShell
Python
+ 1

Arctic Web Map

Arctic Web Map (AWM) is an Arctic-specific web mapping tool allowing researchers to customize map projections for scientifically accurate visualization and analysis, a function that is critical for arctic research but missing in existing web mapping platforms.

data collection
python
wildlife

CSS
JavaScript
Python
+ 1

asrlitcompare

A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.

ASReview
inter-rater reliability
literature screening
+ 1

AppleScript
Awk
Batchfile
+ 14

BGC Viewer

A viewer for biosynthetic gene cluster data.

bioinformatics
Gene Clusters
natural products
+ 1

CSS
Dockerfile
HTML
+ 6

BIOMERO

a scalable and extensible image analysis framework

biaflows
bioimaging
biomero
+ 9

Dockerfile
Python
Shell