Software | Research Software Directory

Emma

Emma is a project to create a platform for development of application for Spark and DockerSwarm clusters.

Big data

Shell
Scala
Python
+ 1

4

3

iReceptor Gateway

A Distributed Data Management System and Scientific Gateway for Mining Next Generation Sequence Data from Immune Responses.

immunogenomics
Immunology
iReceptor

PHP
Shell
Blade
+ 7

12

3

Lilio

A Python package for generating calendars to resample timeseries into training and target data for machine learning. Named after the inventor of the Gregorian Calendar.

AI
Preprocessing
S2S

Python
Shell

5

3

s2spy

A high-level python package integrating expert knowledge and artificial intelligence to boost sub-seasonal to seasonal (S2S) forecasting.

AI
S2S

Python
Shell

6

3

SalientDetector-python

If you want to automate your object detection or photo-identification image tasks in an easy way with free open-source software, the SalientDetector-Python is the tool for you

Image processing

Jupyter Notebook
Python
Makefile

2

3

SlicerRT

SlicerRT allows users to analyze spatio-temporal accumulation of the therapeutic dosage (radiation, thermal, etc.). Tools include dose visualization, quantitative metrics computation, comparison, and import/export to DICOM format.

C++
Python
CMake
+ 1

3

SyGMa

SyGMa provides fast and lightweight predictions of human metabolites to support discovery scientists design better and safer drugs

Workflow technologies

Python

2

AutoEncodersDLSCA

Code underlying the publication: Autoencoder-enabled model portability for reducing hyperparameter tuning efforts in side-channel analysis

Autoencoders
Hyperparameter Tuning
Portability
+ 3

Python
Other
Markdown

1

2

Code underlying the publication: Maintenance Optimization for Multi-Component Systems with a Single Sensor

Condition-based maintenance
Inspection planning
Maintenance
+ 2

Python
Other

4

2

Code underlying the publication: "PATE: Proximity-Aware Time series anomaly Evaluation"

Anomaly detection
Evaluation Metrics
Precision
+ 2

Python
YAML
Markdown
+ 1

3

2

Code underlying the publication: "Self-Supervised PPG Representation Learning Shows High Inter-Subject Variability"

Autoencoder
Human Activity Recognition
Inter-Subject Variability
+ 3

Python
Other
Markdown
+ 1

3

2

Data underlying the publication/thesis chapter: Scale Learning in Scale-Equivariant Convolutional Networks

computer vision
Convolutional neural network (CNN)
equivariance
+ 3

Jupyter Notebook
Python
Markdown
+ 5

6

2

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