Software

A real-time pipeline to search for Fast Radio Bursts and other transient radio sources.

A Python environment to interface and couple oceanographic and other earth system model codes.

Combine existing numerical codes in an easy to use Python framework. With AMUSE you can simulate objects such as star clusters, proto-planetary disks and galaxies.

A package for the calculation of scattering angles and cross sections.

3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.

A framework and predictor based on support vector machine and random walk graph kernel for scoring protein-protein interfaces.

SlicerRT allows users to analyze spatio-temporal accumulation of the therapeutic dosage (radiation, thermal, etc.). Tools include dose visualization, quantitative metrics computation, comparison, and import/export to DICOM format.

This tool can convert and visualize radio astronomy measurement sets, as well as most LOFAR intermediate data products. It also performs RFI mitigation.

Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.

OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.