Software | Research Software Directory

COPASI

COPASI is an open source software for simulation and analysis of biochemical networks and their dynamics. It provides simulations using ODEs, SDEs, or Gillespie's stochastic simulation algorithm, with optional discrete events. COPASI provides several analyses, optimization, and parameter estimation.

Dynamics
optimization
Parameter estimation
+ 3

(Batchfile)
(C)
(C#)
+ 17

12

2887

DuMux

DuMux - DUNE for Multi-{Phase, Component, Scale, Physics, …} flow and transport in porous media and more. The swiss army knife of porous media research. Open-source simulator in modern C++.

Earth and Environmental Sciences
Engineering
Finite volume method
+ 9

(C)
(C++)
(CMake)
+ 2

21

465

open-DARTS

Open Delft Advanced Research Terra Simulator is a simulation framework for forward and inverse modelling and uncertainty quantification of multi-physics (thermo-hydro-mechanical-chemical) processes in geo-engineering applications as geothermal, CO2 sequestration, water pumping, and hydrogen storage.

energy transition
environmental modelling
geothermal
+ 3

(C++)
(CMake)
(Cuda)
+ 2

13

55

Numerical models and datasets concerning the publication:"Electrocatalytic reaction-driven flow"

COMSOL multiphysics software
Simulation

1

11

GridFormat

Header-only C++ Library for grid file I/O

Grid-based PDE methods
grid file I/O
mesh file I/O
+ 3

(C++)
(CMake)
(Dockerfile)
+ 1

2

complex_stylized_supply_chain_model_generator

Code: Complex Stylized Supply Chain Model - Automatic Graph Generator

graph generator
model
Simulation
+ 1

(JSON)
(Other)
(Python)
+ 1

1

0

Cycle Tempo Automatisation

Automatisation
Cycle Tempo
Flowsheet software
+ 2

1

0

quality_diversity_sparse_data

Code: Quality Diversity Algorithms for Calibrating a Supply Chain Simulation Model with Sparse Data

calibration
quality diversity
Simulation
+ 2

("Jupyter Notebook")
(Other)
(Python)
+ 1

1

0

Scripts for AWE Control Design and Simulation

airborne wind energy
Controls
Simulation

1

0

Software for Industrial Mobile Manipulation Virtual Micro Challenge 2022

Mobile manipulation
robotics
Robot Operating System (ROS)
+ 1

6

0

structure_calibration_sparse_data

Code: Structural Calibration for Supply Chain Simulation Models with Sparse Data

Simulation
sparse data
structure
+ 2

(Automake)
(Other)
(Python)
+ 2

1

0

Supplementary code to the paper: Flexible Enterprise Optimization With Constraint Programming

Constraint programming (Computer science)
deep learning
Enterprise engineering
+ 2

2

0