All software
JupyterLab dataset browser for THREDDS
A browser that allows you to include NetCDF data stored in THREDDS catalog into a Jupyter Notebook.
- Big data
- Optimized data handling
- (CSS)
- (JavaScript)
- ("Jupyter Notebook")
- + 2
Lokum
Deploy GlusterFS, Docker, Spark and JupyterHub services on bare-metal cluster.
- Big data
- High performance computing
- Optimized data handling
- (Dockerfile)
- (HCL)
- (Python)
- + 2
LXCat
An open-access website for collecting, displaying, and downloading electron and ion scattering cross sections for modeling low temperature plasmas.
- Optimized data handling
- (CSS)
- (Dockerfile)
- (JavaScript)
- + 2
One button compute
Web application for running a CWL workflow on a bunch of files.
- Optimized data handling
- Workflow technologies
- ("Common Workflow Language")
- (HTML)
- (Python)
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- (Batchfile)
- (Brainfuck)
- (C)
- + 23
pdbtbx-ts
Want to parse Protein Data Bank files in JavaScript
- Optimized data handling
- (JavaScript)
- (Rust)
- (TypeScript)
Scifeon Lims, ELN and Workflow Automation
Scifeon is a modular lab informatics platform combining LIMS and ELN to streamline workflows, ensure compliance, and increase productivity—designed for biotech and regulated labs.
- auditory processing
- Big data
- bioinformatics
- + 14
STAC2dCache
STAC2dCache is a Python tool to create and manipulate STAC catalogs on a dCache storage system.
- Data
- geospatial
- metadata
- + 2
- ("Jupyter Notebook")
- (Python)
XrayTIFF2h5
This repository provides a workflow to transform X-rays data originally stored in .TIFF format, into .h5. Overall, this makes the data more compressed and easier to process in machine learning pipelines, such as unsat.
- Optimized data handling
- Workflows
- (Makefile)
- (Python)