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Allelic Variation Explorer
If you are studying how single nucleotide polymorphisms are clustered in genomic samples, then the Allelic Variation Explorer can help you visualize them.
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Description
- It provides a genome browser with a track where the samples which have the same SNPs are clustered together, it can be used by bioinformations to explain why certain samples have the same phenotype
- It takes variants of a large number of samples and for the requested genomic range it performs clustering and visualizes the clusters
- the clustering is done quick and on the fly
- the reference genome, gene and feature tracks are rendered from static files, so you don't need any application server just a static web server
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Mateusz Kuzak
Netherlands eScience Center
Netherlands eScience Center
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Updated 8 months ago
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