Fakhereh (Sarah) Alidoost
haddock3
Haddock3 (High Ambiguity Driven protein-protein DOCKing) is a modular software for for the integrative modeling and refinement of biomolecular complexes.
- biomolecular complexes
- docking
- energetics
- + 4
- Python
- Fortran
- C++
- + 9
ESMValTool
The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.
- Big data
- Optimized data handling
- Visualization
- + 1
- NCL
- Python
- R
- + 6
ESMValCore
ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.
- Big data
- Optimized data handling
- Visualization
- + 1
- Python
- Jupyter Notebook
- HTML
- + 5
DIANNA
Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.
- Explainable AI
- Image processing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- TeX
s2spy
A high-level python package integrating expert knowledge and artificial intelligence to boost sub-seasonal to seasonal (S2S) forecasting.
- AI
- S2S
- Python
- Shell
ewatercycle
The eWaterCycle package makes it easier to use hydrological models without having intimate knowledge about how to install and run the models.
- Inter-operability & linked data
- Multi-scale & multi model simulations
- Optimized data handling
- + 1
- Python
- Dockerfile
MOTrainer
Measurement Operator Trainer for data assimilation purposes.
- Data assimilation
- High performance computing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- TeX
- + 1
STEMMUS_SCOPE
Integrated code of SCOPE and STEMMUS
- Jupyter Notebook
- MATLAB
- Python
- + 2
infra-stemmus-scope
Set-up and run STEMMUS-SCOPE on SURF research cloud (SRC)
zampy
Tool for downloading Land Surface Model input data
- Data
- Data management
- Workflow technologies
- Python
PyStemmusScope
A python package for running the STEMMUS-SCOPE model
- Jupyter Notebook
- Python
- Shell
- + 1
rcoins
Identify continuous lines in a spatial network.
- geospatial
- Networks
- R
- R