Netherlands eScience Center
National platform for the development and application of domain overarching software and methods for the scientific community
Stroll
Semantic Role labeling for Dutch. Understanding who does what, where, to whom.
- Text analysis & natural language processing
- Python
- Shell
Structure from Motion
Construct 3D pointclouds from a set of 2D images
- Dockerfile
- Java
- MATLAB
- + 2
Subzero.jl
Subzero.jl is a native Julia discrete-element model (DEM) for exploring fine-scale sea ice dynamics
- Julia Package
- polar ice
- Julia
- TeX
sv-callers
Highly portable parallel workflow to detect structural variants in cancer genomes.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell
sv-channels
Genome-wide detection of structural variants using deep learning
- Machine learning
- Jupyter Notebook
- Python
- R
- + 1
sv-gen
Highly portable parallel workflow to generate artificial genomes with structural variants.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell
Swan
Swan is a Python package to create statistical models to predict molecular properties
- Machine learning
- Jupyter Notebook
- Python
swiftmhc
SwiftMHC is a deep learning algorithm for predicting pMHC structure and binding affinity at the same time.
- deep learning
- Protein-Protein Interaction
- Transformer
- Jupyter Notebook
- Mask
- Python
- + 1
swyft
swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.
- Bayesian Inference
- Data Analysis
- Jupyter Notebook
- Python
talkr
{talkr} is an R package that offers a set of convenience functions for quality control, visualisation and analysis of conversational data. Most notably it provides a range of plotting functions that play well with ggplot and the tidyverse.
- conversation
- talk
- turn-taking
- + 1
- R
- Rez
TaxoTagger
DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- Makefile
- Mustache
- Python
TaxoTagger Webapp
Webapp for DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- Python