SoftwareApplication
identifier: 10.5281/zenodo.1145886
name: Allelic Variation Explorer
description: If you are studying how single nucleotide polymorphisms are clustered in genomic samples, then the Allelic Variation Explorer can help you visualize them.
description: * It provides a genome browser with a track where the samples which have the same SNPs are clustered together, it can be used by bioinformations to explain why certain samples have the same phenotype * It takes variants of a large number of samples and for the requested genomic range it performs clustering and visualizes the clusters * the clustering is done quick and on the fly * the reference genome, gene and feature tracks are rendered from static files, so you don't need any application server just a static web server
code repository: https://github.com/nlesc-ave/ave-rest-service
author: https://orcid.org/0000-0003-0087-6021
author: https://orcid.org/0000-0002-5821-2060
keywords: Visualization
programming language: AngelScript
programming language: Dockerfile
programming language: Python
license:
  creative work: creativeWork
    name: Apache-2.0

https://orcid.org/0000-0003-0087-6021
type: Person
given name: Mateusz
family name: Kuzak
name: Mateusz Kuzak
affiliation: Organization
  name: Netherlands eScience Center

https://orcid.org/0000-0002-5821-2060
type: Person
given name: Stefan
family name: Verhoeven
name: Stefan Verhoeven
affiliation: Organization
  name: Netherlands eScience Center