Simulation code accompanying the publication "Cohesin supercoils DNA during loop extrusion"
Research objective: computationally determine the linking number of plasmids after SMC-mediated DNA loop extrusion with twist and topoisomerase-mediated Lk change Type of research: Comparison of computational model to experimental bulk plasmid assays Method of data collection: 1D Monte Carlo simulations Type of data: custom python code (.py) and .json data file